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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015820743.1_cds_XP_016500526.1_14344
CDS Infomation

[gene=LOC107818958] [db_xref=GeneID:107818958] [protein=RHOMBOID-like protein 1] [protein_id=XP_016500526.1] [location=join(43731..44083,44716..44879,45249..45412,46048..46197,46296..46405,46645..46765,46911..47036)] [gbkey=CDS]
Sequence

ATGGGAAGGAGGACTCCGTCGAGTAATTCTTCGCCGGAGTCGGACCTCGATACGATCAAA
GTTCAACCTCGGGACAGCGGTCCGAATCTAGAGGAACGTGATCGGTACCCTGCACATTAT
TCTAACCAATATTCTCGTCCTCCGGGGCCGCCGCCTAATTATCAGCCCTATACAAAATGG
TTTCCATGGCTAGTACCTATTGTTGCTATTGTCAATGTCGGTCTTTTTGTTCTTGTTATG
TACGTAAATGATTGTCCTCGTAATAGTCAAAATTGTTTTGGAACCGAGATCTTTGGTCGT
TATGCATTTCAAGATGTCCATGAGAACCCTTTACTTGGTCCCTCCACAACAACGTTACAA
AAGTTGGGTGCTCTTGACGTGAAAAAAGTGGTTGAAGGTCGTCAATTATGGAGATTACTT
TCTTGCATGTGGTTACATGCTGGTGTATTTCATGTTGCTGCAAATATGTTGAGCTTGTTA
TTTGTAGGTATTCGTCTTGAGCAAGAGTTTGGATTTGTGAGAATTGGTCCACTCTATGTT
TTGGCTGGGGTTGGAGGGAGTCTATTATCAGCTCTATTTGTGAGGAAAAAAATCTCTGTT
GGTGCTTCTGGTGCATTGTTTGGTCTACTTGGAGCTATGCTATCTGAACTCCTCACAAAT
TGGACATTATATGAAAACAAGTTGGCCACACTGCTTACTTTGCTCCTCATAATTGCGATA
AATCTAGCTGTTGGAATTCTTCCTCATGTGGACAATTTTGCACATCTTGGAGGATTTATA
ACTGGATTTCTTCTTGGTTGTGTCCTTTTGATTCGTCCACAATTTGGATGGGTGGATAAG
AAAAAAGCACCTTCTGGCTATTTTGCGGCATCAAAAAAATCCAAGTACAAGATTTATCAA
TACATACTATTGATTATGTCATTAGCAATTTTTTTAACTGGGTTTATTCTTGGTCTAATT
CTTCTAACAAGTGGATGGGATGGTAACACACATTGCTCTTGGTGTCATTACTTAAGTTGT
GTCCCAACACCTCTATGGTCCTGTACTGAAGCACGTTGTGCGACCACCCAGCTAGGGAAC
CAAATGAACATGACGTGCACATCTAATCATAAAAATGGGACTTATATTTTGTCAAACCCC
AACAACACTATAGAGATTCAAATGCTATGTTCCAAACTTTGCAAATGA

Peptide Sequence

PEP ID

XP_016500526.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 1 [Nicotiana tabacum]
Sequence

MGRRTPSSNSSPESDLDTIKVQPRDSGPNLEERDRYPAHYSNQYSRPPGPPPNYQPYTKW
FPWLVPIVAIVNVGLFVLVMYVNDCPRNSQNCFGTEIFGRYAFQDVHENPLLGPSTTTLQ
KLGALDVKKVVEGRQLWRLLSCMWLHAGVFHVAANMLSLLFVGIRLEQEFGFVRIGPLYV
LAGVGGSLLSALFVRKKISVGASGALFGLLGAMLSELLTNWTLYENKLATLLTLLLIIAI
NLAVGILPHVDNFAHLGGFITGFLLGCVLLIRPQFGWVDKKKAPSGYFAASKKSKYKIYQ
YILLIMSLAIFLTGFILGLILLTSGWDGNTHCSWCHYLSCVPTPLWSCTEARCATTQLGN
QMNMTCTSNHKNGTYILSNPNNTIEIQMLCSKLCK

Transcript Sequence

Gene sequence data has not been registered.